CREATE DATABASE  IF NOT EXISTS `resistance` /*!40100 DEFAULT CHARACTER SET latin1 */;
USE `resistance`;
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CREATE TABLE `organisme_mo` (
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  `espece` varchar(45) DEFAULT NULL,
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INSERT INTO `organisme_mo` VALUES ('ATCC201684','Aphanomyces','euteiches','A. euteiches');
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UNLOCK TABLES;

--
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CREATE TABLE `mesures_plante` (
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  `date_mesure` date NOT NULL COMMENT 'date de l''analyse d''image',
  `id_boite` int(11) DEFAULT NULL,
  `brunissement` float DEFAULT NULL COMMENT 'surface de brunissement de la racine',
  `R1` float DEFAULT NULL COMMENT 'surface de la racine principale',
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  `cotyledons` float DEFAULT NULL COMMENT 'jaunissement des cotyledons',
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/*!40000 ALTER TABLE `image_boite` ENABLE KEYS */;
UNLOCK TABLES;

--
-- Table structure for table `organisme_pl`
--

DROP TABLE IF EXISTS `organisme_pl`;
/*!40101 SET @saved_cs_client     = @@character_set_client */;
/*!40101 SET character_set_client = utf8 */;
CREATE TABLE `organisme_pl` (
  `hapmap_id` varchar(5) NOT NULL,
  `lignee` varchar(7) DEFAULT NULL,
  `population` varchar(10) DEFAULT NULL,
  `pays` varchar(30) DEFAULT NULL,
  `categorie` varchar(30) DEFAULT NULL,
  `provenance_graines` varchar(50) DEFAULT NULL,
  `statut` varchar(20) DEFAULT NULL,
  PRIMARY KEY (`hapmap_id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
/*!40101 SET character_set_client = @saved_cs_client */;

--
-- Dumping data for table `organisme_pl`
--
-- ORDER BY:  `hapmap_id`

LOCK TABLES `organisme_pl` WRITE;
/*!40000 ALTER TABLE `organisme_pl` DISABLE KEYS */;
INSERT INTO `organisme_pl` VALUES ('HM001','L000163','SA22322','Syria','CC8','INRA-Montpellier','Sequenced+Called'),('HM002','L000174','SA28064','Cyprus','CC8','INRA-Montpellier','Sequenced+Called'),('HM003','L000544','ESP105-L','Spain','CC8','INRA-Montpellier','Sequenced+Called'),('HM004','L000736','DZA045-6','Algeria','RILParent/CC8','INRA-Montpellier','Sequenced+Called'),('HM005','L000734','DZA315-16','Algeria','RILParent/CC8','INRA-Montpellier','Sequenced+Called'),('HM006','L000530','F83005-5','France','RILParent/CC8','INRA-Montpellier','Sequenced+Called'),('HM007','L000651','Salses71B','France','CC8','INRA-Montpellier','Sequenced+Called'),('HM008','L000368','DZA012-J','Algeria','CC8','INRA-Montpellier','Sequenced+Called'),('HM009','L000555','GRC020-B','Greece','CC16','INRA-Montpellier','Sequenced+Called'),('HM010','L000154','SA24714','Italy','CC16','INRA-Montpellier','Sequenced+Called'),('HM011','L000543','DZA327-7','Algeria','CC16','INRA-Montpellier','Sequenced+Called'),('HM012','L000239','SA26063','Morocco','CC16','INRA-Montpellier','Sequenced+Called'),('HM013','L000648','Salses42B','France','CC16','INRA-Montpellier','Sequenced+Called'),('HM014','L000542','DZA233-4','Algeria','CC16','INRA-Montpellier','Sequenced+Called'),('HM015','L000550','F11013-3','France','CC16','INRA-Montpellier','Sequenced+Called'),('HM016','L000049','SA09707','Tunisia','CC16','INRA-Montpellier','Sequenced+Called'),('HM017','','A10','','RIL Parent','INRA-Montpellier','Sequenced+Called'),('HM018','','A20','','RIL Parent','ENSAT-Toulouse','Sequenced+Called'),('HM019','L000527','Borung','','RIL Parent','INRA-Montpellier','Sequenced+Called'),('HM020','TN1.11','TN1.11','','RIL Parent','ENSAT-Toulouse','Sequenced+Called'),('HM021','TN1.21','TN1.21','','RIL Parent','ENSAT-Toulouse','Sequenced+Called'),('HM022','TN3.23','TN3.23','','RIL Parent','ENSAT-Toulouse','Sequenced+Called'),('HM023','TN6.18','TN6.18','','RIL Parent','ENSAT-Toulouse','Sequenced+Called'),('HM024','TN8.3','TN8.3','','RIL Parent','ENSAT-Toulouse','Sequenced+Called'),('HM025','TN9.22','TN9.22','','RIL Parent','ENSAT-Toulouse','Sequenced+Called'),('HM026','L000450','F11008-C','France','RILParent/CC96','INRA-Montpellier','Sequenced+Called'),('HM027','L000531','F83005-9','France','RILParent/CC144','INRA-Montpellier','Sequenced+Called'),('HM028','L000342','DZA241-2','Algeria','RILParent/CC144','INRA-Montpellier','Sequenced+Called'),('HM029','L000729','R108-C3','','M.tricycla','INRA-Montpellier','Sequenced+Called'),('HM030','L000518','F11013-27','','M.littoralis','INRA-Montpellier','Sequenced+Called'),('HM031','L000545','ESP158-A','Spain','CC32','INRA-Montpellier','Sequenced'),('HM032','L000549','F11005-E','France','CC32','INRA-Montpellier','Sequenced'),('HM033','L000552','F20047-A','France, Corsica','CC32','INRA-Montpellier','Sequenced'),('HM034','L000554','F20089-B','France, Corsica','CC32','INRA-Montpellier','Sequenced'),('HM035','L000679','F66017','France','CC32','INRA-Montpellier','Sequenced'),('HM036','L000337','GRC042-1','Greece','CC32','INRA-Montpellier','Sequenced'),('HM037','L000557','GRC064-B','Greece','CC32','INRA-Montpellier','Sequenced'),('HM038','L000369','PRT180-A','Portugal','CC32','INRA-Montpellier','Sequenced'),('HM039','L000263','SA03116','Israel','CC32','INRA-Montpellier','Sequenced'),('HM040','L000321','SA03780','Italy','CC32','INRA-Montpellier','Sequenced'),('HM041','L000198','SA09048','Libya','CC32','INRA-Montpellier','Sequenced'),('HM042','L000290','SA09119','Turkey','CC32','INRA-Montpellier','Sequenced'),('HM043','L000310','SA09944','Tunisia','CC32','INRA-Montpellier','Sequenced'),('HM044','L000245','SA14161','Jordan','CC32','INRA-Montpellier','Sequenced'),('HM045','L000144','SA14163','Jordan','CC32','INRA-Montpellier','Sequenced'),('HM046','L000213','SA27882','Morocco','CC32','INRA-Montpellier','Sequenced'),('HM047','L000654','DZA014','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM048','L000475','DZA016-F','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM049','L000360','DZA058-5','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM050','L000477','DZA058-J','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM051','L000357','DZA202-4','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM052','L000639','DZA210-3','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM053','L000601','DZA246-6','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM054','L000395','DZA309-A','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM055','L000675','DZA326','Algeria','CC64','INRA-Montpellier','In Progress'),('HM056','L000416','ESP074-A','Spain','CC64','INRA-Montpellier','Sequenced'),('HM057','L000512','ESP155-D','Spain','CC64','INRA-Montpellier','Sequenced'),('HM058','L000513','ESP163-E','Spain','CC64','INRA-Montpellier','Sequenced'),('HM059','L000449','F11012-A','France','CC64','INRA-Montpellier','Sequenced'),('HM060','L000520','F20015-10','France, Corsica','CC64','INRA-Montpellier','Sequenced'),('HM061','L000645','GRC033-B2','Greece','CC64','INRA-Montpellier','Sequenced'),('HM062','L000379','GRC063-D','Greece','CC64','INRA-Montpellier','Sequenced'),('HM063','L000525','PRT176-F','Portugal','CC64','INRA-Montpellier','Sequenced'),('HM064','L000371','PRT178-D','Portugal','CC64','INRA-Montpellier','Sequenced'),('HM065','L000370','PRT179-J','Portugal','CC64','INRA-Montpellier','Sequenced'),('HM066','L000204','SA01489','Israel','CC64','INRA-Montpellier','In Progress'),('HM067','L000265','SA01526','Algeria','CC64','INRA-Montpellier','In Progress'),('HM068','L000274','SA03648','Portugal','CC64','INRA-Montpellier','Sequenced'),('HM069','L000276','SA07749','Tunisia','CC64','INRA-Montpellier','In Progress'),('HM070','L000307','SA08625','Morocco','CC64','INRA-Montpellier','Sequenced'),('HM071','L000297','SA08626','Morocco','CC64','INRA-Montpellier','Sequenced'),('HM072','L000061','SA09357','Algeria','CC64','INRA-Montpellier','Sequenced'),('HM073','L000052','SA09710','Tunisia','CC64','INRA-Montpellier','Sequenced'),('HM074','L000314','SA09866','Algeria','CC64','INRA-Montpellier','In Progress'),('HM075','L000130','SA12451','Italy','CC64','INRA-Montpellier','Sequenced'),('HM076','L000234','SA23859','Tunisia','CC64','INRA-Montpellier','Sequenced'),('HM077','L000232','SA27062','Greece','CC64','INRA-Montpellier','Sequenced'),('HM078','L000228','SA27063','Greece','CC64','INRA-Montpellier','Sequenced'),('HM079','L000362','DZA045-4c','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM080','L000637','DZA061-B3d','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM081','L000356','DZA202-5','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM082','L000355','DZA210-2','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM083','L000354','DZA210-5','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM084','L000394','DZA243-6','Algeria','CC96','INRA-Montpellier','In Progress'),('HM085','L000673','DZA319','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM086','L000674','DZA322--','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM087','L000397','DZA323-1','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM088','L000497','DZA323-D','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM089','L000431','ESP155-A','Spain','CC96','INRA-Montpellier','In Progress'),('HM090','L000437','ESP163-A','Spain','CC96','INRA-Montpellier','In Progress'),('HM091','L000548','ESP171-F','Spain','CC96','INRA-Montpellier','In Progress'),('HM092','L000443','ESP174-A','Spain','CC96','INRA-Montpellier','Sequenced'),('HM093','L000444','ESP173-A','Spain','CC96','INRA-Montpellier','Sequenced'),('HM094','L000574','F13006-1','France','CC96','INRA-Montpellier','In Progress'),('HM095','L000458','F20025-4','France, Corsica','CC96','INRA-Montpellier','In Progress'),('HM096','L000460','F20026-F','France, Corsica','CC96','INRA-Montpellier','In Progress'),('HM097','L000522','F83005-G','France','CC96','INRA-Montpellier','In Progress'),('HM098','L000523','PRT176-12','Portugal','CC96','INRA-Montpellier','In Progress'),('HM099','L000202','SA02840','Cyprus','CC96','INRA-Montpellier','In Progress'),('HM101','','A17_Varma','','','Doug Cook_UCDavis','Sequenced+Called'),('HM102','','CADL','','alfalfa','Charlie Brummer_UGA','Sequenced+Called'),('HM103','L000302','SA04087','Tunisia','CC96','INRA-Montpellier','In Progress'),('HM104','L000303','SA08604','Algeria','CC96','INRA-Montpellier','In Progress'),('HM105','L000293','SA09137','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM106','L000060','SA09434','Tunisia','CC96','INRA-Montpellier','Sequenced'),('HM107','L000047','SA09670','Algeria','CC96','INRA-Montpellier','Sequenced'),('HM108','L000317','SA09715','Tunisia','CC96','INRA-Montpellier','Sequenced'),('HM109','L000126','SA11959','Israel','CC96','INRA-Montpellier','Sequenced'),('HM110','L000225','SA21560','Libya','CC96','INRA-Montpellier','In Progress'),('HM111','L000219','SA27192','Italy','CC96','INRA-Montpellier','Sequenced'),('HM112','L000178','SA28097','Cyprus','CC96','INRA-Montpellier','Sequenced'),('HM113','L000537','CRE007-J','Greece, Crete','CC144','INRA-Montpellier','In Progress'),('HM114','L000338','CRE009-A','Greece, Crete','CC144','INRA-Montpellier','Sequenced'),('HM115','L000529','Cyprus_C','Cyprus','CC144','INRA-Montpellier','In Progress'),('HM116','L000659','DZA211','Algeria','CC144','INRA-Montpellier','In Progress'),('HM117','L000401','ESP031-A','Spain','CC144','INRA-Montpellier','Sequenced'),('HM118','L000410','ESP043-B','Spain','CC144','INRA-Montpellier','Sequenced'),('HM119','L000414','ESP050-B','Spain','CC144','INRA-Montpellier','Sequenced'),('HM120','L000482','ESP095-C','Spain','CC144','INRA-Montpellier','In Progress'),('HM121','L000430','ESP104-A','Spain','CC144','INRA-Montpellier','In Progress'),('HM122','L000546','Esp159-11','Spain','CC144','INRA-Montpellier','In Progress'),('HM123','L000440','ESP163-B','Spain','CC144','INRA-Montpellier','In Progress'),('HM124','L000547','Esp165-D','Spain','CC144','INRA-Montpellier','In Progress'),('HM125','L000445','ESP175-A','Spain','CC144','INRA-Montpellier','Sequenced'),('HM126','L000456','F20015-L','France, Corsica','CC144','INRA-Montpellier','Sequenced'),('HM127','L000455','F20025-F','France, Corsica','CC144','INRA-Montpellier','Sequenced'),('HM128','L000620','F20058-6','France, Corsica','CC144','INRA-Montpellier','Sequenced'),('HM129','L000468','F20069-A','France, Corsica','CC144','INRA-Montpellier','Sequenced'),('HM130','L000467','F20069-C','France, Corsica','CC144','INRA-Montpellier','Sequenced'),('HM131','L000551','F34042-D','France','CC144','INRA-Montpellier','Sequenced'),('HM132','L000376','GRC093-C','Greece','CC144','INRA-Montpellier','In Progress'),('HM133','L000375','GRC098-A','Greece','CC144','INRA-Montpellier','Sequenced'),('HM134','L000267','SA02084','Greece','CC144','INRA-Montpellier','Sequenced'),('HM135','L000332','SA02748','Israel','CC144','INRA-Montpellier','Sequenced'),('HM136','L000270','SA02820','Turkey','CC144','INRA-Montpellier','In Progress'),('HM137','L000322','SA03749','Israel','CC144','INRA-Montpellier','In Progress'),('HM138','L000283','SA08454','Libya','CC144','INRA-Montpellier','Sequenced'),('HM139','L000306','SA08623','Morocco','CC144','INRA-Montpellier','In Progress'),('HM140','L000286','SA09049','Libya','CC144','INRA-Montpellier','In Progress'),('HM141','L000044','SA09456','Tunisia','CC144','INRA-Montpellier','Sequenced'),('HM142','L000315','SA09820','Libya','CC144','INRA-Montpellier','In Progress'),('HM143','L000132','SA10481','Tunisia','CC144','INRA-Montpellier','Sequenced'),('HM144','L000241','SA15951','Portugal, Madeira','CC144','INRA-Montpellier','In Progress'),('HM145','L000146','SA19964','Turkey','CC144','INRA-Montpellier','Sequenced'),('HM146','L000237','SA21302','Libya','CC144','INRA-Montpellier','Sequenced'),('HM147','L000161','SA21362','Libya','CC144','INRA-Montpellier','Sequenced'),('HM148','L000162','SA21590','Libya','CC144','INRA-Montpellier','Sequenced'),('HM149','L000148','SA21819','Cyprus','CC144','INRA-Montpellier','Sequenced'),('HM150','L000238','SA22323','Syria','CC144','INRA-Montpellier','Sequenced'),('HM151','L000165','SA25226','Italy','CC144','INRA-Montpellier','Sequenced'),('HM152','L000166','SA25654','Morocco','CC144','INRA-Montpellier','Sequenced'),('HM153','L000168','SA25898','Italy','CC144','INRA-Montpellier','Sequenced'),('HM154','L000173','SA27778','Morocco','CC144','INRA-Montpellier','Sequenced'),('HM155','L000216','SA27961','Morocco','CC144','INRA-Montpellier','Sequenced'),('HM156','L000217','SA28089','Cyprus','CC144','INRA-Montpellier','Sequenced'),('HM157','L000215','SA28099','Cyprus','CC144','INRA-Montpellier','Sequenced'),('HM158','L000649','Salse46B','France','CC144','INRA-Montpellier','In Progress'),('HM159','L000680','arboretu','France','CC192','INRA-Montpellier','Sequenced'),('HM160','L000340','CRE005-A','Greece, Crete','CC192','INRA-Montpellier','Sequenced'),('HM161','L000365','DZA033-2','Algeria','CC192','INRA-Montpellier','Sequenced'),('HM162','L000538','DZA055-H','Algeria','CC192','INRA-Montpellier','Sequenced'),('HM163','L000358','DZA061-11','Algeria','CC192','INRA-Montpellier','Sequenced'),('HM164','L000350','DZA215-5','Algeria','CC192','INRA-Montpellier','Sequenced'),('HM165','L000344','DZA231-1','Algeria','CC192','INRA-Montpellier','Sequenced'),('HM166','L000343','DZA236-2','Algeria','CC192','INRA-Montpellier','Sequenced'),('HM167','L000341','DZA242-A','Algeria','CC192','INRA-Montpellier','Sequenced'),('HM168','L000400','DZA323-3','Algeria','CC192','INRA-Montpellier','Sequenced'),('HM169','L000404','ESP039-A','Spain','CC192','INRA-Montpellier','Sequenced'),('HM170','L000407','ESP042-B','Spain','CC192','INRA-Montpellier','Sequenced'),('HM171','L000409','ESP045-A','Spain','CC192','INRA-Montpellier','In Progress'),('HM172','L000412','ESP048-E','Spain','CC192','INRA-Montpellier','Sequenced'),('HM173','L000411','ESP048-F','Spain','CC192','INRA-Montpellier','Sequenced'),('HM174','L000610','ESP095-9','Spain','CC192','INRA-Montpellier','In Progress'),('HM175','L000510','ESP098-B','Spain','CC192','INRA-Montpellier','Sequenced'),('HM176','L000421','ESP098-C','Spain','CC192','INRA-Montpellier','Sequenced'),('HM177','L000425','ESP100-G','Spain','CC192','INRA-Montpellier','Sequenced'),('HM178','L000427','ESP103-B','Spain','CC192','INRA-Montpellier','Sequenced'),('HM179','L000438','ESP162-A','Spain','CC192','INRA-Montpellier','Sequenced'),('HM180','L000514','ESP163-C','Spain','CC192','INRA-Montpellier','Sequenced'),('HM181','L000448','ESP175-D','Spain','CC192','INRA-Montpellier','Sequenced'),('HM182','L000451','F11013-A','France','CC192','INRA-Montpellier','Sequenced'),('HM183','L000517','F20015-8','France, Corsica','CC192','INRA-Montpellier','Sequenced'),('HM184','L000463','F20058-B','France, Corsica','CC192','INRA-Montpellier','Sequenced'),('HM185','L000470','F20081-A','France, Corsica','CC192','INRA-Montpellier','Sequenced'),('HM186','L000387','GRC024-H','Greece','CC192','INRA-Montpellier','Sequenced'),('HM187','L000386','GRC033-C','Greece','CC192','INRA-Montpellier','Sequenced'),('HM188','L000383','GRC040-1','Greece','CC192','INRA-Montpellier','Sequenced'),('HM189','L000372','PRT177-C','Portugal','CC192','INRA-Montpellier','Sequenced'),('HM190','L000330','SA02806','Portugal','CC192','INRA-Montpellier','Sequenced'),('HM191','L000277','SA03653','Portugal','CC192','INRA-Montpellier','Sequenced'),('HM192','L000280','SA07763','Tunisia','CC192','INRA-Montpellier','Sequenced'),('HM193','L000309','SA08638','Morocco','CC192','INRA-Montpellier','Sequenced'),('HM194','L000057','SA09700','Tunisia','CC192','INRA-Montpellier','Sequenced'),('HM195','L000313','SA09728','Tunisia','CC192','INRA-Montpellier','Sequenced'),('HM196','L000207','SA09970','Tunisia','CC192','INRA-Montpellier','Sequenced'),('HM197','L000246','SA12455','Italy','CC192','INRA-Montpellier','Sequenced'),('HM198','L000244','SA18543','Tunisia','CC192','INRA-Montpellier','Sequenced'),('HM199','L000147','SA19983','Cyprus','CC192','INRA-Montpellier','Sequenced'),('HM200','L000134','SA19998','Cyprus','CC192','INRA-Montpellier','Sequenced'),('HM201','L000233','SA24576','Morocco','CC192','INRA-Montpellier','In Progress'),('HM202','L000226','SA25941','Italy','CC192','INRA-Montpellier','In Progress'),('HM203','L000167','SA27176','Greece','CC192','INRA-Montpellier','Sequenced'),('HM204','L000172','SA27185','Italy','CC192','INRA-Montpellier','In Progress'),('HM205','L000212','SA28375','Portugal','CC192','INRA-Montpellier','Sequenced'),('HM206','L000650','Salse57A','France','CC192','INRA-Montpellier','Sequenced'),('HM207','','Caliph','','large quantity','','Sequenced'),('HM208','','Paraggio','','large quantity','','Sequenced'),('HM209','','Sephi','','large quantity','','Sequenced'),('HM210','','TN1.1','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM211','','TN1.17','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM212','','TN1.3','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM213','','TN7.11','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM214','','TN7.13','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM215','','TN7.17','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM216','','TN7.18','Tunisia','Tunisian lines','SergeyNoujdine_USC','In Progress'),('HM217','','TN7.19','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM218','','TN7.2','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM219','','TN7.20','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM220','','TN7.22','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM221','','TN7.23','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM222','','TN7.4','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM223','','TN8.15','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM224','','TN8.21','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM225','','TN8.22','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM226','','TN8.23','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM227','','TN8.24','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM228','','TN8.25','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM229','','TN8.28','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM230','','TN8.4','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM231','','TN8.5','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM232','','TN9.12','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM233','','TN9.15','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM234','','TN9.17','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM235','','TN9.20','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM236','','TN9.21','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM237','','TN9.24','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM238','','TN9.5','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM239','','TN1.5','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM240','','TN1.13','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM241','','TN1.15','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM242','','TN1.16','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM243','','TN1.18','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM244','','TN9.3','Tunisia','Tunisian lines','SergeyNoujdine_USC','Sequenced'),('HM245','','TN9.4','Tunisia','Tunisian lines','SergeyNoujdine_USC','In Progress'),('HM246','','Chateauneu','Tunisia','Katy Heath','Katy Heath_UIUC','Sequenced'),('HM247','','Chateauneu','Tunisia','Katy Heath','Katy Heath_UIUC','Sequenced'),('HM248','','Lanautique','Tunisia','Katy Heath','Katy Heath_UIUC','Sequenced'),('HM249','Core01','W6_5001','Portugal','M. truncatula','Noble Foundation','Sequenced'),('HM250','Core02','W6_6037','Spain','M. truncatula','Noble Foundation','Sequenced'),('HM251','Core04','W6_5988','Cyprus','M. truncatula','Noble Foundation','Sequenced'),('HM252','Core05','W6_6018','Germany','M. truncatula','Noble Foundation','Sequenced'),('HM253','Core06','W6_6140','France','M. truncatula','Noble Foundation','In Progress'),('HM254','Core07','PI319051','Spain','M. truncatula','Noble Foundation','Sequenced'),('HM255','Core08','PI505437','Spain','M. truncatula','Noble Foundation','Sequenced'),('HM256','Core09','PI442895','Australia','M. truncatula','Noble Foundation','Sequenced'),('HM257','Core10','PI464815','Turkey','M. truncatula','Noble Foundation','Sequenced'),('HM258','Core11','PI384655','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM259','Core12','PI577599','Greece','M. truncatula','Noble Foundation','Sequenced'),('HM260','Core13','PI516934','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM261','Core14','PI535618','Tunisia','M. truncatula','Noble Foundation','Sequenced'),('HM262','Core15','PI564941','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM263','Core16','PI566889','Turkey','M. truncatula','Noble Foundation','In Progress'),('HM264','Core17','W6_6021','Italy','M. truncatula','Noble Foundation','Sequenced'),('HM265','Core18','W6_5022','Italy','M. truncatula','Noble Foundation','In Progress'),('HM266','Core19','W6_6073','Algeria','M. truncatula','Noble Foundation','Sequenced'),('HM267','Core20','W6_6058','Algeria','M. truncatula','Noble Foundation','Sequenced'),('HM268','Core21','W6_6059','Algeria','M. truncatula','Noble Foundation','Sequenced'),('HM269','Core22','W6_6093','Unknown','M. truncatula','Noble Foundation','Sequenced'),('HM270','Core23','PI493297','Portugal','M. truncatula','Noble Foundation','Sequenced'),('HM271','Core24','PI384664','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM272','Core25','W6_6091','Algeria','M. truncatula','Noble Foundation','In Progress'),('HM273','Core26','PI535614','Tunisia','M. truncatula','Noble Foundation','Sequenced'),('HM274','Core27','PI577626','Algeria','M. truncatula','Noble Foundation','Sequenced'),('HM275','Core28','PI516949','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM276','Core29','PI577627','Algeria','M. truncatula','Noble Foundation','Sequenced'),('HM277','Core30','PI577621','Algeria','M. truncatula','Noble Foundation','Sequenced'),('HM278','Core31','PI577635','France','M. truncatula','Noble Foundation','Sequenced'),('HM279','Core32','W6_6083','Morocco','M. truncatula','Noble Foundation','In Progress'),('HM280','Damas l','D1.2.3','France','Damas lines','ENSAT-Toulouse','Sequenced'),('HM281','Damas l','D2.2.2','France','Damas lines','ENSAT-Toulouse','In Progress'),('HM282','Damas l','D3.3.3','France','Damas lines','ENSAT-Toulouse','Sequenced'),('HM283','Damas l','D4.2.1','France','Damas lines','ENSAT-Toulouse','Sequenced'),('HM284','Damas l','D5.3.1','France','Damas lines','ENSAT-Toulouse','Sequenced'),('HM285','Damas l','D6.2.1','France','Damas lines','ENSAT-Toulouse','Sequenced'),('HM286','Damas l','D7.1.3','France','Damas lines','ENSAT-Toulouse','Sequenced'),('HM287',' Core34','PI_577607','Lebanon','M. truncatula','Noble Foundation','Sequenced'),('HM288',' Core35','PI_577611','Germany','M. truncatula','Noble Foundation','Sequenced'),('HM289',' Core36','PI_577617','Greece','M. truncatula','Noble Foundation','In Progress'),('HM290',' Core37','PI_577640','U.S.','M. truncatula','Noble Foundation','In Progress'),('HM291',' Core38','PI_577648','Morocco','M. truncatula','Noble Foundation','In Progress'),('HM292',' Core39','W6_4980','France','M. truncatula','Noble Foundation','In Progress'),('HM293',' Core40','W6_6023','Italy','M. truncatula','Noble Foundation','In Progress'),('HM294',' Core41','W6_6054','Algeria','M. truncatula','Noble Foundation','Sequenced'),('HM295',' Core42','W6_6064','Algeria','M. truncatula','GRIN_Noble 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Core54','PI_516927','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM308',' Core55','PI_516933','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM309',' Core56','PI_516939','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM310',' Core57','PI_535651','Tunisia','M. truncatula','Noble Foundation','Sequenced'),('HM311',' Core58','PI_535752','Morocco','M. truncatula','Noble Foundation','Sequenced'),('HM312',' Core59','PI_577609','Sweden','M. truncatula','Noble Foundation','In Progress'),('HM313',' Core60','W6_6020','Canada','M. truncatula','Noble Foundation','In Progress'),('HM314',' Core61','W6_4996','Greece','M. truncatula','Noble Foundation','In Progress'),('HM315',' Core62','W6_5990','France','M. truncatula','Noble Foundation','Sequenced'),('HM316',' Core63','W6_6034','Australia','M. truncatula','Noble Foundation','Sequenced'),('HM317',' Core64','PI_535615','Tunisia','M. truncatula','Noble Foundation','Sequenced'),('HM318','','PI495200','France','M. arabica','USDA, ARS, Wrpis, Washington Sta','Sequenced'),('HM319','','PI504540','Greece, Aegan island','M. arborea','USDA, ARS, Wrpis, Washington Sta','Sequenced'),('HM320','','PI440491','Russia, Stavropol','M. cancellata','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM321','','PI534177','Bulgaria','M.constricta','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM322','','PI498790','Greece','M.coronata','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM323','','PI495278','Lebanon','M. doliata','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM324','','PI385014','Tunisia','M. italica','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM325','','PI498902','Morocco','M.laciniata','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM326','','PI251834','Italy','M.lupulina','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM327','','PI499080','Turkey','M. minima','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM328','','PI495379','France, Corsica','M. murex','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM329','','PI495414','Turkey, Icel','M.noeana','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM330','','PI566877','Italy, Sicily','M.polymorpha','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM331','','PI495517','Greece','M.rigidula','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM332','','PI534250','Turkey, Ankara','M. rididuloides','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM333','','PI495581','Turkey, Icel','M.rotata','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM334','','PI535555','Tunisia','M.turbinata','USDA, ARS, Wrpis, Washington Sta','In Progress'),('HM335','','PI568100','Nei Monggol, China ','M.ruthenica','USDA, ARS, Wrpis, Washington Sta','NA'),('HM336','','PI314275','Uzbekistan','M.sativa subsp. Caerulea','USDA, ARS, Wrpis, Washington Sta','NA'),('HM337','','PI495434','Corsica, France','M.praecox','USDA, ARS, Wrpis, Washington Sta','NA'),('HM338','','PI537240','Algeria','M.soleirolii','USDA, ARS, Wrpis, Washington Sta','NA'),('HM339','','PI577445','Abruzzi, Italy','M. prostrata','USDA, ARS, Wrpis, Washington Sta','NA'),('HM501',NULL,'DZA45.5 20',NULL,NULL,NULL,NULL),('HM502',NULL,'D11 nemo',NULL,NULL,NULL,NULL),('HM503',NULL,'E5 nemo',NULL,NULL,NULL,NULL),('HM504',NULL,'05B2',NULL,NULL,NULL,NULL),('HM505',NULL,'05D2',NULL,NULL,NULL,NULL);
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--
-- Table structure for table `boite`
--

DROP TABLE IF EXISTS `boite`;
/*!40101 SET @saved_cs_client     = @@character_set_client */;
/*!40101 SET character_set_client = utf8 */;
CREATE TABLE `boite` (
  `id` int(11) NOT NULL COMMENT 'code barre de la boite',
  `id_manip` int(11) DEFAULT NULL COMMENT 'numéro de manip',
  `num_boite` int(11) DEFAULT NULL COMMENT 'numéro de la boite (par plante et par répétition biologique)',
  `id_pl` varchar(5) DEFAULT NULL COMMENT 'identifiant Hapmap de la plante',
  `repetition` int(11) DEFAULT NULL COMMENT 'numéro de la répétition biologique',
  `contamination` int(11) DEFAULT '0' COMMENT 'est-ce que la boite a été contaminée ?\n0 = non\n1 = oui',
  `inoculee` int(11) DEFAULT '1' COMMENT 'est-ce que la boite a été innoculée ?\n0 = non (en général boite n° 4)\n1 = oui',
  `poids_matiere_fraiche` float DEFAULT NULL COMMENT 'poids en g de l''ensemble des plants à 21j dans une boite',
  `quantite_mycelium` float DEFAULT NULL COMMENT 'quantité de mycélium dans les racines',
  PRIMARY KEY (`id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
/*!40101 SET character_set_client = @saved_cs_client */;

--
-- Dumping data for table `boite`
--
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/*!40000 ALTER TABLE `boite` ENABLE KEYS */;
UNLOCK TABLES;

--
-- Table structure for table `manip`
--

DROP TABLE IF EXISTS `manip`;
/*!40101 SET @saved_cs_client     = @@character_set_client */;
/*!40101 SET character_set_client = utf8 */;
CREATE TABLE `manip` (
  `id` int(11) NOT NULL,
  `date_culture_mo` date NOT NULL COMMENT 'date de mise en culture du microorganisme',
  `date_sterilisation_pl` date NOT NULL COMMENT 'date de stérilisation des plantes',
  `date_production_zoospores` date DEFAULT NULL,
  `date_transfert_sur_boite` date DEFAULT NULL COMMENT 'date de transfert des plants sur boite',
  `date_inoculation` date DEFAULT NULL,
  `date_lecture_15j` date DEFAULT NULL,
  `date_lecture_21j` date DEFAULT NULL,
  `concentration_inoculum` int(11) DEFAULT NULL,
  `id_mo` varchar(20) NOT NULL DEFAULT 'ATCC201684' COMMENT 'identifiant du microorganisme',
  PRIMARY KEY (`id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
/*!40101 SET character_set_client = @saved_cs_client */;

--
-- Dumping data for table `manip`
--
-- ORDER BY:  `id`

LOCK TABLES `manip` WRITE;
/*!40000 ALTER TABLE `manip` DISABLE KEYS */;
INSERT INTO `manip` VALUES (12,'2011-06-12','2011-06-12','2011-06-20','2011-06-20',NULL,'2011-07-06','2011-07-12',90000,'ATCC201684'),(13,'2011-06-24','2011-06-24','2011-06-27','2011-06-27',NULL,'2011-07-13','2011-07-19',86250,'ATCC201684'),(14,'2011-07-08','2011-07-08','2011-07-11','2011-07-11',NULL,'2011-07-27','2011-08-02',85000,'ATCC201684');
/*!40000 ALTER TABLE `manip` ENABLE KEYS */;
UNLOCK TABLES;
/*!40103 SET TIME_ZONE=@OLD_TIME_ZONE */;

/*!40101 SET SQL_MODE=@OLD_SQL_MODE */;
/*!40014 SET FOREIGN_KEY_CHECKS=@OLD_FOREIGN_KEY_CHECKS */;
/*!40014 SET UNIQUE_CHECKS=@OLD_UNIQUE_CHECKS */;
/*!40101 SET CHARACTER_SET_CLIENT=@OLD_CHARACTER_SET_CLIENT */;
/*!40101 SET CHARACTER_SET_RESULTS=@OLD_CHARACTER_SET_RESULTS */;
/*!40101 SET COLLATION_CONNECTION=@OLD_COLLATION_CONNECTION */;
/*!40111 SET SQL_NOTES=@OLD_SQL_NOTES */;

-- Dump completed on 2012-03-12 23:09:54
DROP VIEW IF EXISTS plantes;
CREATE VIEW plantes AS
SELECT 
  pl.hapmap_id, pl.lignee, pl.population, 
  mo.nom AS pathogene, 
  b.repetition, b.id_manip AS manip, b.num_boite AS boite, 
  m15.num_plant AS plante, m15.brunissement AS brun_15, m15.R1 AS R1_15, m15.brunissement_pc AS pc_brun_15, m15.cotyledons AS cotyledons_15, m15.plantes_mortes AS morts_15, m15.R2 AS R2_15,
  m21.brunissement AS brun_21, m21.R1 AS R1_21, m21.brunissement_pc AS pc_brun_21, m21.cotyledons AS cotyledons_21, m21.plantes_mortes AS morts_21, m21.R2 AS R2_21,
  b.poids_matiere_fraiche AS poids
FROM organisme_pl pl 
  JOIN boite b ON (pl.hapmap_id = b.id_pl)
  JOIN manip ON (b.id_manip = manip.id)
  JOIN organisme_mo mo ON (manip.id_mo = mo.id)
  JOIN mesures_plante m15 ON (b.id = m15.id_boite)
  JOIN image_boite i15 ON (m15.fichier = i15.fichier AND m15.position_boite = i15.position)
  JOIN mesures_plante m21 ON (b.id = m21.id_boite)
  JOIN image_boite i21 ON (m21.fichier = i21.fichier AND m21.position_boite = i21.position)
WHERE i15.jour=15 AND i21.jour=21 AND m15.num_plant=m21.num_plant
ORDER BY pl.hapmap_id, b.repetition, b.id_manip, b.num_boite, m15.num_plant;



