Prioritization:EcolA Transcriptome
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(Created page with '= Transcriptome data for ''Escherichia coli'' K-12= == GEO data == * GPL: [http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL199 199]] * arrays: A total set of 631 arrays hav…')
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Revision as of 15:00, 18 January 2011
Contents |
Transcriptome data for Escherichia coli K-12
GEO data
- GPL: 199]
- arrays: A total set of 631 arrays have been compiled.
- List of selected GSE series: 1121, 4511, 4556, 4562, 4778, 6425, 6426, 6836, 6923, 7326, 7379, 7885, 8708, 9582, 9755, 9814, 10158, 10974, 11183, 12797, 13418, 17505, 17506, 17507
Raw data have been used i.e., CEL files.
Normalization
- within array normalization: RMA normalization was applied using the R/Bioconductor affy library.
- between array normalization: each value was divided by the median of the array values i.e., x/median(x)
